Issues

• Clarify distinctions between COB files & their intended contents

  2026 COB Workshop
  OBOFoundry/COB#317 · Filter by author sebastianduesing opened on Jan 26, 2026
  1

  

• PATO to COB connection

  OBOFoundry/COB#315 · Filter by author cmungall opened on Jan 15, 2026
  2

  

• Refine definition of 'complex of molecules' to soften the non-covalent binding criterion?

  OBOFoundry/COB#306 · Filter by author nataled opened on Aug 7, 2025

• Refine definition of 'complex of molecules' and 'protein-containing complex' to involve cardinality

  OBOFoundry/COB#303 · Filter by author sebastianduesing opened on Jun 2, 2025
  1

• Except grouping classes from rule that top-level classes should be in COB

  OBOFoundry/COB#302 · Filter by author sebastianduesing opened on Jun 2, 2025

• Revision to COB:0000013 'molecule' editor note needed

  chemistryfast fix
  OBOFoundry/COB#300 · Filter by author nataled opened on Apr 7, 2025
  

• NTR: life cycle temporal boundary

  OBOFoundry/COB#299 · Filter by author matentzn opened on Mar 24, 2025

• How to align an ontology with COB

  OBOFoundry/COB#298 · Filter by author sebastianduesing opened on Mar 10, 2025
  3

• Provide cob-base and redirect cob-to-external.owl to it

  OBOFoundry/COB#297 · Filter by author balhoff opened on Feb 25, 2025
  9

  

• Update docs and workflows to use cob-edit.tsv

  OBOFoundry/COB#292 · Filter by author jamesaoverton opened on Jan 23, 2025
  

• Where do simulations and computational models live in COB

  OBOFoundry/COB#289 · Filter by author cmungall opened on Dec 11, 2024
  3

• relabel cellular anatomical entity to cellular anatomical structure

  OBOFoundry/COB#287 · Filter by author cmungall opened on Oct 17, 2024

• What do we do about CHEBI atoms that do not classify under COB atom

  OBOFoundry/COB#274 · Filter by author cmungall opened on Aug 17, 2024

• Add a report showing usages of COB classes

  OBOFoundry/COB#270 · Filter by author cmungall opened on Aug 17, 2024

• Undefined superclass of OBI:0000260 (plan) - dual hierarchy

  OBOFoundry/COB#265 · Filter by author andredekker opened on Jul 26, 2024
  1

  

• Define what "COB base" is supposed to be

  OBOFoundry/COB#261 · Filter by author matentzn opened on Apr 6, 2024
  1

• Discussion: Define the relationship between COB and RO

  RO
  OBOFoundry/COB#260 · Filter by author matentzn opened on Apr 4, 2024 · Alpha Release
  9

• Replace CARO IDs in cob-non-native OWL export

  OBOFoundry/COB#248 · Filter by author cmungall opened on Jan 25, 2024
  8

• Release COB with COB ids + mappings, rather than with the mapped IDs

  OBOFoundry/COB#244 · Filter by author matentzn opened on Aug 18, 2023
  33

• COB changes preferred labels of several ontologies

  OBOFoundry/COB#243 · Filter by author matentzn opened on Aug 18, 2023
  5

• Consider linking from COB documentation page to recent Ontology Summit presentation

  documentationgood first issue
  OBOFoundry/COB#242 · Filter by author jamesaoverton opened on Aug 17, 2023
  2

• Is COB "action specification" supposed to be different from IAO term?

  OBOFoundry/COB#240 · Filter by author ddooley opened on May 3, 2023
  

• Proposed SOP: all NTR PRs where there exists at least one equivalent in OBO should be accompanied by a change in cob-to-external

  OBOFoundry/COB#238 · Filter by author cmungall opened on May 1, 2023
  3

• Add term-metadata schema to COB

  technical
  OBOFoundry/COB#236 · Filter by author matentzn opened on Apr 28, 2023
  3

• not sure how a plan can be sibling of both disposition and role

  OBOFoundry/COB#220 · Filter by author wdduncan opened on Nov 30, 2022
  6