diff --git a/example_data/example_data_table.csv b/example_data/example_data_table.csv
index c608349..cb3b87e 100644
--- a/example_data/example_data_table.csv
+++ b/example_data/example_data_table.csv
@@ -1,4 +1,4 @@
 FILE,CELL,PHENO_VAR,N
-/lustre/scratch124/humgen/projects_v2/cardinal_analysis/analysed_datasets/eqtls/F3_QTLs_updated_12_2025/TileDB-sumstat/example_data/dummy_out_ENSG0000010000.tsv.gz,T_gd,1.5,4000
-/lustre/scratch124/humgen/projects_v2/cardinal_analysis/analysed_datasets/eqtls/F3_QTLs_updated_12_2025/TileDB-sumstat/example_data/dummy_out_ENSG0000010001.tsv.gz,T_gd,1.5,4000
+dummy_out_ENSG0000010000.tsv.gz,T_gd,1.5,4000
+dummy_out_ENSG0000010001.tsv.gz,T_gd,1.5,4000
 
diff --git a/example_data/trait_list.csv b/example_data/trait_list.csv
index 8d9626b..1599be5 100644
--- a/example_data/trait_list.csv
+++ b/example_data/trait_list.csv
@@ -1,2 +1,2 @@
 FILE,N
-/nfs/users/nfs_b/ba13/TileDB-sumstat/example_data/dummy_out_ENSG0000010001.tsv.gz,2000
+example_data/dummy_out_ENSG0000010001.tsv.gz,2000
diff --git a/ingestion_config_pkgh.nf b/ingestion_config_pkgh.nf
deleted file mode 100644
index 74c1d0e..0000000
--- a/ingestion_config_pkgh.nf
+++ /dev/null
@@ -1,13 +0,0 @@
-params {
-            ingest = true
-            file_path_ingestion = "/nfs/users/nfs_b/ba13/TileDB-sumstat/example_data/trait_list.csv"
-            mapping_file = "/nfs/users/nfs_b/ba13/TileDB-sumstat/example_data/mapping_file_test.csv"
-            ingestion = true
-            type_sumstat = "qtl"
-            mac = 10
-            qc = false
-            ingestion_chunk_files = 1
-            tiledb_name = "TileDB_test"
-            outdir = "/nfs/users/nfs_b/ba13/TileDB-sumstat/test"  // Add this missing parameter
-            publish_dir_mode = 'copy'  // Add this missing parameter
-        }
diff --git a/run_ingestion_pkgh.sh b/run_ingestion_pkgh.sh
deleted file mode 100644
index dc88044..0000000
--- a/run_ingestion_pkgh.sh
+++ /dev/null
@@ -1,16 +0,0 @@
-#!/bin/bash
-#BSUB -n 2
-#BSUB -M 4G
-#BSUB -q normal
-#BSUB -W 12:00 # time in HH:MM - don't put seconds!
-#BSUB -G team151
-#BSUB -R "select[mem>4G] rusage[mem=4G] span[hosts=1]"
-#BSUB -o tiledb_ingestion.pkgh.log  # Log file for each job
-#BSUB -e tiledb_ingestion.pkgh.err  # Error file for each job
-set -eo pipefail
-
-#Add the following line if you need to activate conda envs in your script
-module load HGI/common/conda
-source activate /software/cardinal_analysis/ht/conda_envs/tdbsumstat
-module load HGI/common/nextflow/25.04.6
-nextflow run ../TileDB-sumstat/main.nf -c ingestion_config_pkgh.nf -profile sanger,conda -work-dir workdir_tiledb -resume