Errors when specifying column labels that have space in Linkam output text file

[jpk96]

Exported text files from the LINK software when Linkam shear stage is used have column titles that have a space in them (e.g. T Top, T Bottom).

When listing these columns in the input yaml, and running it, the following errors are reported.

---

Traceback (most recent call last):
File "/nfs/chess/sw/miniforge3_chap/envs/CHAP_tomo/bin/CHAP", line 33, in
sys.exit(load_entry_point('ChessAnalysisPipeline', 'console_scripts', 'CHAP')())
File "/nfs/chess/sw/ChessAnalysisPipeline/CHAP/runner.py", line 156, in main
runner(run_config, pipeline_config, common_comm)
File "/nfs/chess/sw/ChessAnalysisPipeline/CHAP/runner.py", line 183, in runner
data = run(pipeline_config,
File "/nfs/chess/sw/ChessAnalysisPipeline/CHAP/runner.py", line 325, in run
return pipeline.execute()[0]['data']
File "/nfs/chess/sw/ChessAnalysisPipeline/CHAP/pipeline.py", line 43, in execute
data = item.execute(data=data, **kwargs)
File "/nfs/chess/sw/ChessAnalysisPipeline/CHAP/pipeline.py", line 279, in execute
data = method(**args)
File "/nfs/chess/sw/ChessAnalysisPipeline/CHAP/common/reader.py", line 124, in read
elif not col in data:
TypeError: argument of type 'bool' is not iterable

---

The input yaml is located at /nfs/chess/scratch/user/jpk96/chap_test/link_shear_reader.yaml.

Based on the last debug message, it looks like the routine correctly identified the column title: "read" with {'inputdir': '/nfs/chess/scratch/user/jpk96/chap_test', 'filename': '/nfs/chess/scratch/user/jpk96/chap_test/raw/Linkam_Data/link_data_exported_clean/setup_28-02-25_16-39-36-34_Exported.txt', 'columns': ['T Top', 'T Bottom']}