NCBI filtered vs unfiltered

[nickdos]

Tracking before and after facets for NCBI data, as a check in case we might be missing chunks for some reason...

RefSeq (dr18509) before

https://nectar-arga-dev-1.ala.org.au/api/select?q=dataResourceUid:dr18509&facet=true&facet.field=matchType&facet.field=kingdom&rows=0

{
  "numFound": 272351,
  "matchType": [
    "exactMatch", 168044,
    "higherMatch", 51350,
    "canonicalMatch", 12490,
    "fuzzyMatch", 99,
    "phraseMatch", 0,
    "taxonIdMatch",  0
  ],
  "kingdom": [
    "Bacteria", 228844,
    "Animalia", 1236,
    "Archaea", 1101,
    "Fungi", 389,
    "Plantae", 225,
    "Protista", 97,
    "Virus", 49,
    "Chromista", 29,
    "Protozoa", 7,
    "Viroid",   6,
    "Eukaryota", 0
  ]
}

fq=-kingdom:* = 40,368
fq=-matchType:* = 40,368

Genome (dr18541) before

view-source:https://nectar-arga-dev-1.ala.org.au/api/select?q=dataResourceUid:dr18541&facet=true&facet.field=matchType&facet.field=kingdom&rows=0

{
 "numFound":1336054,
  "matchType": [
    "exactMatch", 842993,
    "higherMatch", 274992,
    "canonicalMatch", 29329,
    "fuzzyMatch", 170,
    "taxonIdMatch", 2,
    "phraseMatch", 0
  ],
  "kingdom": [
    "Bacteria", 1115155,
    "Animalia", 11009,
    "Fungi", 10410,
    "Archaea", 4215,
    "Virus", 3092,
    "Plantae", 2094,
    "Protista", 900,
    "Chromista", 571,
    "Protozoa", 24,
    "Viroid", 6,
    "Eukaryota", 3
  ]
}

fq=-kingdom:* = 188,575
fq=-matchType:* = 188,568